Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AL391825.1-201ENST00000457671 1364 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AC009477.1-201ENST00000452936 217 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AL133215.2-201ENST00000609242 977 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TEX28P1-201ENST00000613479 1221 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TEX28P2-201ENST00000617764 1221 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 KRT8P22-201ENST00000562317 1415 ntBASIC12.84□□□□□ -0.35
C11orf88Q6PI97 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
C11orf88Q6PI97 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 AC015909.5-201ENST00000624336 2266 ntBASIC12.83□□□□□ -0.35
C11orf88Q6PI97 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
C11orf88Q6PI97 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
C11orf88Q6PI97 AL591122.2-201ENST00000624125 1853 ntBASIC12.83□□□□□ -0.36
C11orf88Q6PI97 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms