Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC092810.2-201ENST00000431570 362 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 CDCA4P4-201ENST00000435216 680 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AC113385.2-201ENST00000614465 762 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AC139713.2-207ENST00000641556 1292 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AL139424.3-202ENST00000641619 917 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PGK1P2-201ENST00000431702 1214 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 TBC1D3P6-201ENST00000505954 962 ntBASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 MIR4326-201ENST00000582203 59 ntBASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 KF455155.1-201ENST00000604493 303 ntBASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 POLL-206ENST00000370172 2308 ntTSL 2 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDC42BPAQ5VT25 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 AC020910.6-201ENST00000623084 1459 ntBASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 AIRN-201ENST00000601203 4374 ntBASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 AC089987.1-201ENST00000551654 2209 ntBASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDC42BPAQ5VT25 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 RPL10-203ENST00000406022 748 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 MIR8071-1-201ENST00000616769 65 ntBASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 MIR8071-2-201ENST00000616772 65 ntBASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPAQ5VT25 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms