Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 TCAM1P-207ENST00000485295 1537 ntBASIC13.49□□□□□ -0.25
PRKCDQ05655 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
PRKCDQ05655 AC007541.1-201ENST00000570282 1469 ntBASIC13.49□□□□□ -0.25
PRKCDQ05655 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 AC215219.1-201ENST00000400706 1817 ntBASIC13.49□□□□□ -0.25
PRKCDQ05655 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 RN7SKP230-201ENST00000365642 335 ntBASIC13.49□□□□□ -0.25
PRKCDQ05655 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 AL132655.2-201ENST00000596276 594 ntBASIC13.49□□□□□ -0.25
PRKCDQ05655 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCDQ05655 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
PRKCDQ05655 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCDQ05655 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.49□□□□□ -0.25
PRKCDQ05655 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PRKCDQ05655 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PRKCDQ05655 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PRKCDQ05655 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCDQ05655 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PRKCDQ05655 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
PRKCDQ05655 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCDQ05655 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
PRKCDQ05655 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.48□□□□□ -0.25
PRKCDQ05655 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.48□□□□□ -0.25
PRKCDQ05655 ELK1P1-201ENST00000485699 580 ntBASIC13.48□□□□□ -0.25
PRKCDQ05655 AC022137.2-201ENST00000503482 481 ntBASIC13.48□□□□□ -0.25
PRKCDQ05655 GCOM2-201ENST00000509133 1104 ntBASIC13.48□□□□□ -0.25
PRKCDQ05655 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.48□□□□□ -0.25
PRKCDQ05655 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 AC006538.3-201ENST00000612495 578 ntBASIC13.48□□□□□ -0.25
PRKCDQ05655 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.48□□□□□ -0.25
PRKCDQ05655 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.48□□□□□ -0.25
PRKCDQ05655 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PRKCDQ05655 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PRKCDQ05655 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms