Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNB3P54284 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.08■□□□□ 0.32
CACNB3P54284 AC092638.2-201ENST00000441105 947 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.08■□□□□ 0.32
CACNB3P54284 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.08■□□□□ 0.32
CACNB3P54284 AC084752.1-201ENST00000509766 622 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 SORD2P-201ENST00000558556 1069 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 MIR2392-201ENST00000584881 84 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNB3P54284 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.08■□□□□ 0.32
CACNB3P54284 AC006158.1-201ENST00000610661 249 ntBASIC17.08■□□□□ 0.32
CACNB3P54284 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.08■□□□□ 0.32
CACNB3P54284 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.08■□□□□ 0.32
CACNB3P54284 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.08■□□□□ 0.32
CACNB3P54284 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CACNB3P54284 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CACNB3P54284 CICP14-201ENST00000629111 2732 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CACNB3P54284 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 PYY2-201ENST00000315776 282 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 AL161932.2-201ENST00000435436 679 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNB3P54284 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNB3P54284 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNB3P54284 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.07■□□□□ 0.32
CACNB3P54284 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.07■□□□□ 0.32
CACNB3P54284 OR5BD1P-201ENST00000532527 817 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 AC068867.1-201ENST00000559855 150 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.07■□□□□ 0.32
CACNB3P54284 AL021707.6-201ENST00000609212 491 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 MIR6756-201ENST00000616240 63 ntBASIC17.07■□□□□ 0.32
CACNB3P54284 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CACNB3P54284 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CACNB3P54284 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CACNB3P54284 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 LINC01815-202ENST00000641468 1409 ntBASIC17.06■□□□□ 0.32
CACNB3P54284 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 TEKT4P2-202ENST00000559466 1312 ntBASIC17.06■□□□□ 0.32
CACNB3P54284 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CACNB3P54284 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 ALG1L6P-201ENST00000515248 758 ntBASIC17.06■□□□□ 0.32
CACNB3P54284 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB3P54284 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 RN7SL357P-201ENST00000581065 298 ntBASIC17.06■□□□□ 0.32
CACNB3P54284 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CACNB3P54284 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.06■□□□□ 0.32
CACNB3P54284 SIGLEC22P-201ENST00000599104 714 ntBASIC17.06■□□□□ 0.32
CACNB3P54284 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNB3P54284 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.06■□□□□ 0.32
CACNB3P54284 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CACNB3P54284 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.06■□□□□ 0.32
CACNB3P54284 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CACNB3P54284 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CACNB3P54284 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.05■□□□□ 0.32
CACNB3P54284 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CACNB3P54284 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms