Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 PES1-205ENST00000405677 2708 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GTF2A1P52655 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.32□□□□□ -0.12
GTF2A1P52655 KRT18P27-201ENST00000427733 1299 ntBASIC14.32□□□□□ -0.12
GTF2A1P52655 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.32□□□□□ -0.12
GTF2A1P52655 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.32□□□□□ -0.12
GTF2A1P52655 MIR4313-201ENST00000580760 101 ntBASIC14.32□□□□□ -0.12
GTF2A1P52655 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GTF2A1P52655 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GTF2A1P52655 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GTF2A1P52655 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GTF2A1P52655 AP001282.1-201ENST00000531301 1499 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 RNU1-129P-201ENST00000384064 167 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 KRT18P31-201ENST00000506277 1292 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 U1.21-201ENST00000580816 167 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 AC008667.4-201ENST00000607370 168 ntBASIC14.31□□□□□ -0.12
GTF2A1P52655 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.31□□□□□ -0.12
GTF2A1P52655 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC14.31□□□□□ -0.12
GTF2A1P52655 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GTF2A1P52655 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms