Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 SLC25A6P4-201ENST00000586535 553 ntBASIC11.59□□□□□ -0.55
CDC34P49427 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
CDC34P49427 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 AC015688.4-201ENST00000580780 1647 ntBASIC11.59□□□□□ -0.55
CDC34P49427 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.59□□□□□ -0.55
CDC34P49427 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 TUBB8P4-201ENST00000511806 1324 ntBASIC11.59□□□□□ -0.55
CDC34P49427 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.59□□□□□ -0.55
CDC34P49427 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CDC34P49427 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.58□□□□□ -0.55
CDC34P49427 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC34P49427 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CDC34P49427 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
CDC34P49427 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC34P49427 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC34P49427 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.58□□□□□ -0.56
CDC34P49427 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.58□□□□□ -0.56
CDC34P49427 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.58□□□□□ -0.56
CDC34P49427 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.58□□□□□ -0.56
CDC34P49427 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.58□□□□□ -0.56
CDC34P49427 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.58□□□□□ -0.56
CDC34P49427 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.58□□□□□ -0.56
CDC34P49427 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.58□□□□□ -0.56
CDC34P49427 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 SALL4P5-201ENST00000419001 1760 ntBASIC11.58□□□□□ -0.56
CDC34P49427 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
CDC34P49427 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 HLA-A-201ENST00000376802 1334 ntBASIC11.58□□□□□ -0.56
CDC34P49427 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CDC34P49427 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
CDC34P49427 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms