Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GPATCH1-201ENST00000170564 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 PADI1-201ENST00000375471 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 ZNF574-204ENST00000600245 3598 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC9.44□□□□□ -0.9
PCP4P48539 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 AC024563.2-201ENST00000603282 481 ntBASIC9.44□□□□□ -0.9
PCP4P48539 AL031258.1-201ENST00000623562 325 ntBASIC9.44□□□□□ -0.9
PCP4P48539 GDI1-215ENST00000630693 786 ntTSL 4 BASIC9.44□□□□□ -0.9
PCP4P48539 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
PCP4P48539 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 GPR89P-201ENST00000407924 1495 ntBASIC9.44□□□□□ -0.9
PCP4P48539 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 RCC2P3-201ENST00000418112 1537 ntBASIC9.44□□□□□ -0.9
PCP4P48539 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 AL138690.1-201ENST00000568811 2243 ntBASIC9.44□□□□□ -0.9
PCP4P48539 ZNF665-206ENST00000600412 2273 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 MPP4-212ENST00000620095 2364 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
PCP4P48539 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PCP4P48539 AP1B1-204ENST00000405198 3838 ntTSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 NTNG1-205ENST00000370068 4034 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PCP4P48539 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 ATP1B2-201ENST00000250111 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 PPFIBP2-208ENST00000528883 2580 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
PCP4P48539 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 ZFYVE1-208ENST00000556143 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 EDNRA-202ENST00000358556 3823 ntTSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 EMP1-202ENST00000396301 675 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 AP001412.1-201ENST00000608405 714 ntBASIC9.43□□□□□ -0.9
PCP4P48539 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC9.43□□□□□ -0.9
PCP4P48539 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 LILRB1-206ENST00000396332 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 CALD1-203ENST00000393118 4281 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 FCGR1A-201ENST00000369168 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
PCP4P48539 MEGF11-202ENST00000395614 3423 ntTSL 5 BASIC9.43□□□□□ -0.9
PCP4P48539 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms