RNA–Protein interactions for RNA: ENST00000556143.5

ZFYVE1-208, Transcript of zinc finger FYVE-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-208ENST00000556143 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
ZFYVE1-208ENST00000556143 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
ZFYVE1-208ENST00000556143 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
ZFYVE1-208ENST00000556143 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
ZFYVE1-208ENST00000556143 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
ZFYVE1-208ENST00000556143 APLP2Q06481 763 aa16.62■□□□□ 0.25
ZFYVE1-208ENST00000556143 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
ZFYVE1-208ENST00000556143 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
ZFYVE1-208ENST00000556143 MYT1Q01538 1121 aa16.28■□□□□ 0.2
ZFYVE1-208ENST00000556143 TRIM41Q8WV44 630 aa16.27■□□□□ 0.19
ZFYVE1-208ENST00000556143 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
ZFYVE1-208ENST00000556143 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
ZFYVE1-208ENST00000556143 ATP1B4Q9UN42 357 aaPredicted RBP15.99■□□□□ 0.15
ZFYVE1-208ENST00000556143 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
ZFYVE1-208ENST00000556143 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
ZFYVE1-208ENST00000556143 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
ZFYVE1-208ENST00000556143 ABCC9O60706 1549 aa15.8■□□□□ 0.12
ZFYVE1-208ENST00000556143 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
ZFYVE1-208ENST00000556143 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
ZFYVE1-208ENST00000556143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
ZFYVE1-208ENST00000556143 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
ZFYVE1-208ENST00000556143 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
ZFYVE1-208ENST00000556143 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
ZFYVE1-208ENST00000556143 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
ZFYVE1-208ENST00000556143 TRIM26Q12899 539 aaPredicted RBP15.46■□□□□ 0.06
ZFYVE1-208ENST00000556143 PPARGC1BQ86YN6 1023 aaKnown RBP15.38■□□□□ 0.05
ZFYVE1-208ENST00000556143 ITGAEP38570 1179 aa15.34■□□□□ 0.05
ZFYVE1-208ENST00000556143 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
ZFYVE1-208ENST00000556143 HRCP23327 699 aa15.29■□□□□ 0.04
ZFYVE1-208ENST00000556143 NEFLP07196 543 aa15.28■□□□□ 0.04
ZFYVE1-208ENST00000556143 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
ZFYVE1-208ENST00000556143 FBLN2P98095 1184 aa15.13■□□□□ 0.01
ZFYVE1-208ENST00000556143 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
ZFYVE1-208ENST00000556143 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
ZFYVE1-208ENST00000556143 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
ZFYVE1-208ENST00000556143 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
ZFYVE1-208ENST00000556143 FAM50AQ14320 339 aaKnown RBP15.09■□□□□ 0.01
ZFYVE1-208ENST00000556143 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
ZFYVE1-208ENST00000556143 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
ZFYVE1-208ENST00000556143 TRIM52Q96A61 297 aa15□□□□□ -0.01
ZFYVE1-208ENST00000556143 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
ZFYVE1-208ENST00000556143 RB1CC1Q8TDY2 1594 aa14.92□□□□□ -0.02
ZFYVE1-208ENST00000556143 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
ZFYVE1-208ENST00000556143 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
ZFYVE1-208ENST00000556143 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
ZFYVE1-208ENST00000556143 NACADO15069 1562 aa14.8□□□□□ -0.04
ZFYVE1-208ENST00000556143 CNGB1Q14028 1251 aaPredicted RBP14.8□□□□□ -0.04
ZFYVE1-208ENST00000556143 NEUROD1Q13562 356 aa14.78□□□□□ -0.04
ZFYVE1-208ENST00000556143 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
ZFYVE1-208ENST00000556143 ARID3CA6NKF2 412 aa14.72□□□□□ -0.05
ZFYVE1-208ENST00000556143 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
ZFYVE1-208ENST00000556143 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
ZFYVE1-208ENST00000556143 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.06
ZFYVE1-208ENST00000556143 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
ZFYVE1-208ENST00000556143 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
ZFYVE1-208ENST00000556143 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
ZFYVE1-208ENST00000556143 ANP32CO43423 234 aa14.63□□□□□ -0.07
ZFYVE1-208ENST00000556143 BCANQ96GW7 911 aa14.63□□□□□ -0.07
ZFYVE1-208ENST00000556143 EEA1Q15075 1411 aa14.58□□□□□ -0.08
ZFYVE1-208ENST00000556143 NEFMP07197 916 aa14.58□□□□□ -0.08
ZFYVE1-208ENST00000556143 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
ZFYVE1-208ENST00000556143 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
ZFYVE1-208ENST00000556143 DCAF1Q9Y4B6 1507 aa14.57□□□□□ -0.08
ZFYVE1-208ENST00000556143 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
ZFYVE1-208ENST00000556143 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
ZFYVE1-208ENST00000556143 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
ZFYVE1-208ENST00000556143 STAG3Q9UJ98 1225 aa14.53□□□□□ -0.08
ZFYVE1-208ENST00000556143 ZNF316A6NFI3 1004 aaPredicted RBP14.51□□□□□ -0.09
ZFYVE1-208ENST00000556143 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
ZFYVE1-208ENST00000556143 TONSLQ96HA7 1378 aa14.48□□□□□ -0.09
ZFYVE1-208ENST00000556143 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
ZFYVE1-208ENST00000556143 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
ZFYVE1-208ENST00000556143 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
ZFYVE1-208ENST00000556143 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
ZFYVE1-208ENST00000556143 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.09
ZFYVE1-208ENST00000556143 CLIP1P30622 1438 aa14.45□□□□□ -0.1
ZFYVE1-208ENST00000556143 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
ZFYVE1-208ENST00000556143 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
ZFYVE1-208ENST00000556143 BCL11AQ9H165 835 aa14.41□□□□□ -0.1
ZFYVE1-208ENST00000556143 GOLGA3Q08378 1498 aa14.39□□□□□ -0.11
ZFYVE1-208ENST00000556143 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
ZFYVE1-208ENST00000556143 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
ZFYVE1-208ENST00000556143 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
ZFYVE1-208ENST00000556143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
ZFYVE1-208ENST00000556143 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
ZFYVE1-208ENST00000556143 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
ZFYVE1-208ENST00000556143 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
ZFYVE1-208ENST00000556143 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
ZFYVE1-208ENST00000556143 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
ZFYVE1-208ENST00000556143 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
ZFYVE1-208ENST00000556143 RTL5Q5HYW3 569 aaPredicted RBP14.27□□□□□ -0.13
ZFYVE1-208ENST00000556143 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
ZFYVE1-208ENST00000556143 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
ZFYVE1-208ENST00000556143 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
ZFYVE1-208ENST00000556143 CFDP1Q9UEE9 299 aaPredicted RBP14.25□□□□□ -0.13
ZFYVE1-208ENST00000556143 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
ZFYVE1-208ENST00000556143 SMARCA2P51531 1590 aa14.21□□□□□ -0.13
ZFYVE1-208ENST00000556143 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
ZFYVE1-208ENST00000556143 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
ZFYVE1-208ENST00000556143 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms