RNA–Protein interactions for RNA: ENST00000396301.7

EMP1-202, Transcript of epithelial membrane protein 1, humanhuman

TSL 2 BASIC

Gene EMP1, Length 675 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-202ENST00000396301 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
EMP1-202ENST00000396301 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
EMP1-202ENST00000396301 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
EMP1-202ENST00000396301 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
EMP1-202ENST00000396301 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
EMP1-202ENST00000396301 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
EMP1-202ENST00000396301 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
EMP1-202ENST00000396301 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
EMP1-202ENST00000396301 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
EMP1-202ENST00000396301 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
EMP1-202ENST00000396301 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
EMP1-202ENST00000396301 HRCP23327 699 aa19.1■□□□□ 0.65
EMP1-202ENST00000396301 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
EMP1-202ENST00000396301 ADRA2BP18089 450 aa19.03■□□□□ 0.64
EMP1-202ENST00000396301 FOXD1Q16676 465 aa18.94■□□□□ 0.62
EMP1-202ENST00000396301 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
EMP1-202ENST00000396301 ABCC9O60706 1549 aa18.68■□□□□ 0.58
EMP1-202ENST00000396301 KCNA4P22459 653 aa18.6■□□□□ 0.57
EMP1-202ENST00000396301 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
EMP1-202ENST00000396301 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
EMP1-202ENST00000396301 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
EMP1-202ENST00000396301 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
EMP1-202ENST00000396301 ZEB1P37275 1124 aaPredicted RBP18.33■□□□□ 0.52
EMP1-202ENST00000396301 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
EMP1-202ENST00000396301 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
EMP1-202ENST00000396301 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
EMP1-202ENST00000396301 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
EMP1-202ENST00000396301 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
EMP1-202ENST00000396301 PELP1Q8IZL8 1130 aaKnown RBP18.09■□□□□ 0.49
EMP1-202ENST00000396301 NACADO15069 1562 aa18.08■□□□□ 0.49
EMP1-202ENST00000396301 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
EMP1-202ENST00000396301 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
EMP1-202ENST00000396301 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
EMP1-202ENST00000396301 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
EMP1-202ENST00000396301 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
EMP1-202ENST00000396301 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
EMP1-202ENST00000396301 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
EMP1-202ENST00000396301 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
EMP1-202ENST00000396301 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
EMP1-202ENST00000396301 WIZO95785 1651 aa17.8■□□□□ 0.44
EMP1-202ENST00000396301 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
EMP1-202ENST00000396301 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
EMP1-202ENST00000396301 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
EMP1-202ENST00000396301 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
EMP1-202ENST00000396301 EEA1Q15075 1411 aa17.61■□□□□ 0.41
EMP1-202ENST00000396301 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
EMP1-202ENST00000396301 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
EMP1-202ENST00000396301 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
EMP1-202ENST00000396301 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
EMP1-202ENST00000396301 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
EMP1-202ENST00000396301 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
EMP1-202ENST00000396301 CEP162Q5TB80 1403 aa17.47■□□□□ 0.39
EMP1-202ENST00000396301 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
EMP1-202ENST00000396301 MYT1Q01538 1121 aa17.43■□□□□ 0.38
EMP1-202ENST00000396301 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
EMP1-202ENST00000396301 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
EMP1-202ENST00000396301 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
EMP1-202ENST00000396301 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
EMP1-202ENST00000396301 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
EMP1-202ENST00000396301 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
EMP1-202ENST00000396301 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
EMP1-202ENST00000396301 KIF21BO75037 1637 aa17.37■□□□□ 0.37
EMP1-202ENST00000396301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
EMP1-202ENST00000396301 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
EMP1-202ENST00000396301 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
EMP1-202ENST00000396301 SOGA1O94964 1423 aa17.28■□□□□ 0.36
EMP1-202ENST00000396301 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
EMP1-202ENST00000396301 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
EMP1-202ENST00000396301 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
EMP1-202ENST00000396301 MSH5O43196 834 aa17.17■□□□□ 0.34
EMP1-202ENST00000396301 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
EMP1-202ENST00000396301 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
EMP1-202ENST00000396301 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
EMP1-202ENST00000396301 ZBTB22O15209 634 aa17.13■□□□□ 0.33
EMP1-202ENST00000396301 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
EMP1-202ENST00000396301 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
EMP1-202ENST00000396301 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
EMP1-202ENST00000396301 CLIP1P30622 1438 aa17.06■□□□□ 0.32
EMP1-202ENST00000396301 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
EMP1-202ENST00000396301 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
EMP1-202ENST00000396301 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
EMP1-202ENST00000396301 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
EMP1-202ENST00000396301 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
EMP1-202ENST00000396301 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
EMP1-202ENST00000396301 CUX2O14529 1486 aa16.92■□□□□ 0.3
EMP1-202ENST00000396301 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
EMP1-202ENST00000396301 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
EMP1-202ENST00000396301 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
EMP1-202ENST00000396301 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
EMP1-202ENST00000396301 MIER1Q8N108 512 aa16.85■□□□□ 0.29
EMP1-202ENST00000396301 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
EMP1-202ENST00000396301 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
EMP1-202ENST00000396301 ARAP1Q96P48 1450 aa16.83■□□□□ 0.28
EMP1-202ENST00000396301 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
EMP1-202ENST00000396301 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
EMP1-202ENST00000396301 APLP2Q06481 763 aa16.8■□□□□ 0.28
EMP1-202ENST00000396301 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
EMP1-202ENST00000396301 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
EMP1-202ENST00000396301 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
EMP1-202ENST00000396301 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms