Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC026748.1-201ENST00000624349 3251 ntBASIC14.98□□□□□ -0.01
HOXC13P31276 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC13P31276 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
HOXC13P31276 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.98□□□□□ -0.01
HOXC13P31276 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC13P31276 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC13P31276 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC13P31276 RN7SL8P-201ENST00000461771 266 ntBASIC14.98□□□□□ -0.01
HOXC13P31276 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.98□□□□□ -0.01
HOXC13P31276 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC13P31276 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HOXC13P31276 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC13P31276 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.98□□□□□ -0.01
HOXC13P31276 AP001065.2-201ENST00000617205 644 ntBASIC14.98□□□□□ -0.01
HOXC13P31276 AC242376.2-201ENST00000619355 883 ntBASIC14.98□□□□□ -0.01
HOXC13P31276 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
HOXC13P31276 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HOXC13P31276 AL009178.2-201ENST00000597278 2719 ntBASIC14.98□□□□□ -0.01
HOXC13P31276 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.98□□□□□ -0.01
HOXC13P31276 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HOXC13P31276 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HOXC13P31276 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HOXC13P31276 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC13P31276 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.97□□□□□ -0.01
HOXC13P31276 RN7SL67P-201ENST00000492147 296 ntBASIC14.97□□□□□ -0.01
HOXC13P31276 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.97□□□□□ -0.01
HOXC13P31276 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.97□□□□□ -0.01
HOXC13P31276 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.97□□□□□ -0.01
HOXC13P31276 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC13P31276 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HOXC13P31276 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC13P31276 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.96□□□□□ -0.01
HOXC13P31276 AC015909.3-201ENST00000572855 1794 ntBASIC14.96□□□□□ -0.01
HOXC13P31276 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 AP000356.3-201ENST00000382243 753 ntBASIC14.96□□□□□ -0.01
HOXC13P31276 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
HOXC13P31276 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC13P31276 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.96□□□□□ -0.01
HOXC13P31276 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC13P31276 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HOXC13P31276 MIR3677-201ENST00000578964 60 ntBASIC14.96□□□□□ -0.01
HOXC13P31276 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms