Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
HOXC12P31275 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HOXC12P31275 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HOXC12P31275 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HOXC12P31275 AC020910.5-201ENST00000623668 1865 ntBASIC13.02□□□□□ -0.32
HOXC12P31275 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
HOXC12P31275 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HOXC12P31275 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HOXC12P31275 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 CYP46A4P-201ENST00000414953 267 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 AC016700.1-201ENST00000429424 312 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 HIST2H2BB-201ENST00000449108 381 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HOXC12P31275 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.02□□□□□ -0.33
HOXC12P31275 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
HOXC12P31275 AC138649.2-201ENST00000615886 705 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 MIR7845-201ENST00000618396 99 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 AC144831.1-201ENST00000573312 2656 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.02□□□□□ -0.33
HOXC12P31275 AC092135.3-201ENST00000624151 1846 ntBASIC13.02□□□□□ -0.33
HOXC12P31275 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.02□□□□□ -0.33
HOXC12P31275 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HOXC12P31275 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
HOXC12P31275 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 INTS4P1-203ENST00000641008 3683 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 AC091046.1-201ENST00000331871 207 ntBASIC13.01□□□□□ -0.33
HOXC12P31275 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HOXC12P31275 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HOXC12P31275 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.01□□□□□ -0.33
HOXC12P31275 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms