Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 FAU-201ENST00000279259 461 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 EEF1DP2-201ENST00000433698 843 ntBASIC13.83□□□□□ -0.2
LAMA1P25391 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LAMA1P25391 RN7SL767P-201ENST00000493013 295 ntBASIC13.83□□□□□ -0.2
LAMA1P25391 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 MIR4746-201ENST00000579802 71 ntBASIC13.83□□□□□ -0.2
LAMA1P25391 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.83□□□□□ -0.2
LAMA1P25391 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 AC092384.3-202ENST00000564646 2873 ntBASIC13.83□□□□□ -0.2
LAMA1P25391 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LAMA1P25391 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.83□□□□□ -0.2
LAMA1P25391 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 AC015909.5-201ENST00000624336 2266 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC13.82□□□□□ -0.2
LAMA1P25391 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.82□□□□□ -0.2
LAMA1P25391 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 RN7SL788P-201ENST00000460504 316 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LAMA1P25391 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LAMA1P25391 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 AL354702.1-201ENST00000442006 1960 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 WASH7P-201ENST00000488147 1351 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LAMA1P25391 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 AC027612.2-202ENST00000445955 1199 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 KRT18P62-201ENST00000446618 1287 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.82□□□□□ -0.2
LAMA1P25391 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.82□□□□□ -0.2
LAMA1P25391 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.82□□□□□ -0.2
LAMA1P25391 TPT1P6-201ENST00000458298 514 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LAMA1P25391 AC142086.5-202ENST00000562500 217 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 AL359091.4-201ENST00000610052 409 ntBASIC13.82□□□□□ -0.2
LAMA1P25391 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LAMA1P25391 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LAMA1P25391 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 MYADML-201ENST00000474610 2147 ntBASIC13.81□□□□□ -0.2
LAMA1P25391 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 NHP2P1-201ENST00000335274 462 ntBASIC13.81□□□□□ -0.2
LAMA1P25391 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LAMA1P25391 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LAMA1P25391 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms