Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 AC005562.1-201ENST00000583030 3219 ntBASIC14.75□□□□□ -0.05
VCLP18206 AC087386.2-201ENST00000623212 4637 ntBASIC14.75□□□□□ -0.05
VCLP18206 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.75□□□□□ -0.05
VCLP18206 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 AC105206.1-202ENST00000314927 2368 ntBASIC14.75□□□□□ -0.05
VCLP18206 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 FKBP4P6-201ENST00000457486 1332 ntBASIC14.75□□□□□ -0.05
VCLP18206 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.75□□□□□ -0.05
VCLP18206 BNIP3P42-201ENST00000454982 569 ntBASIC14.75□□□□□ -0.05
VCLP18206 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.75□□□□□ -0.05
VCLP18206 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.75□□□□□ -0.05
VCLP18206 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VCLP18206 BNIP3P29-201ENST00000598302 571 ntBASIC14.75□□□□□ -0.05
VCLP18206 AC011447.5-201ENST00000616168 564 ntBASIC14.75□□□□□ -0.05
VCLP18206 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.75□□□□□ -0.05
VCLP18206 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.75□□□□□ -0.05
VCLP18206 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VCLP18206 AC092053.3-201ENST00000641308 4975 ntBASIC14.75□□□□□ -0.05
VCLP18206 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
VCLP18206 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
VCLP18206 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VCLP18206 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VCLP18206 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.74□□□□□ -0.05
VCLP18206 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VCLP18206 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.74□□□□□ -0.05
VCLP18206 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.74□□□□□ -0.05
VCLP18206 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.74□□□□□ -0.05
VCLP18206 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.74□□□□□ -0.05
VCLP18206 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.74□□□□□ -0.05
VCLP18206 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.74□□□□□ -0.05
VCLP18206 RN7SL713P-201ENST00000582127 302 ntBASIC14.74□□□□□ -0.05
VCLP18206 ZACNP1-201ENST00000612259 710 ntBASIC14.74□□□□□ -0.05
VCLP18206 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.74□□□□□ -0.05
VCLP18206 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
VCLP18206 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.74□□□□□ -0.05
VCLP18206 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VCLP18206 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms