Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.44□□□□□ -0.1
CAPN1P07384 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.44□□□□□ -0.1
CAPN1P07384 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.44□□□□□ -0.1
CAPN1P07384 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 RNA5SP486-201ENST00000515961 83 ntBASIC14.44□□□□□ -0.1
CAPN1P07384 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CAPN1P07384 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.44□□□□□ -0.1
CAPN1P07384 AC138951.2-201ENST00000623455 1161 ntBASIC14.44□□□□□ -0.1
CAPN1P07384 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CAPN1P07384 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CAPN1P07384 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 AL136172.1-201ENST00000598590 1394 ntBASIC14.44□□□□□ -0.1
CAPN1P07384 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CAPN1P07384 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CAPN1P07384 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.43□□□□□ -0.1
CAPN1P07384 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CAPN1P07384 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN1P07384 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CAPN1P07384 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CAPN1P07384 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN1P07384 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 AL590640.2-201ENST00000457038 527 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 FAM8A2P-201ENST00000528813 1142 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.43□□□□□ -0.1
CAPN1P07384 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.43□□□□□ -0.1
CAPN1P07384 AC023310.1-201ENST00000554836 735 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CAPN1P07384 RN7SL560P-201ENST00000577943 264 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 GPR182-203ENST00000622922 591 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 AC012617.1-204ENST00000586340 2305 ntBASIC14.43□□□□□ -0.1
CAPN1P07384 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CAPN1P07384 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CAPN1P07384 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN1P07384 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 CICP20-201ENST00000443330 2801 ntBASIC14.42□□□□□ -0.1
CAPN1P07384 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 374.3 ms