Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.72□□□□□ -0.21
HCN1O60741 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 AP001267.2-201ENST00000532619 2086 ntBASIC13.72□□□□□ -0.21
HCN1O60741 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.72□□□□□ -0.21
HCN1O60741 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.72□□□□□ -0.21
HCN1O60741 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.72□□□□□ -0.21
HCN1O60741 RPL13AP20-201ENST00000459725 609 ntBASIC13.72□□□□□ -0.21
HCN1O60741 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.72□□□□□ -0.21
HCN1O60741 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 ECM1P1-201ENST00000604092 1279 ntBASIC13.72□□□□□ -0.21
HCN1O60741 AC009542.2-202ENST00000619004 1067 ntBASIC13.72□□□□□ -0.21
HCN1O60741 AC055811.4-201ENST00000624039 1754 ntBASIC13.72□□□□□ -0.21
HCN1O60741 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCN1O60741 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HCN1O60741 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HCN1O60741 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.71□□□□□ -0.21
HCN1O60741 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.71□□□□□ -0.21
HCN1O60741 EIF3FP3-201ENST00000434851 1086 ntBASIC13.71□□□□□ -0.21
HCN1O60741 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.71□□□□□ -0.21
HCN1O60741 Z93015.1-201ENST00000451718 390 ntBASIC13.71□□□□□ -0.21
HCN1O60741 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.71□□□□□ -0.21
HCN1O60741 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.71□□□□□ -0.21
HCN1O60741 FAM8A2P-201ENST00000528813 1142 ntBASIC13.71□□□□□ -0.21
HCN1O60741 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HCN1O60741 MIR4538-201ENST00000581377 78 ntBASIC13.71□□□□□ -0.21
HCN1O60741 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.71□□□□□ -0.21
HCN1O60741 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.71□□□□□ -0.21
HCN1O60741 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
HCN1O60741 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 AL137783.1-201ENST00000623494 1896 ntBASIC13.71□□□□□ -0.21
HCN1O60741 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HCN1O60741 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCN1O60741 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCN1O60741 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HCN1O60741 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.71□□□□□ -0.22
HCN1O60741 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.71□□□□□ -0.22
HCN1O60741 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HCN1O60741 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
HCN1O60741 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HCN1O60741 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms