Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX1O43812 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DUX1O43812 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX1O43812 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX1O43812 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX1O43812 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX1O43812 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX1O43812 KRT8P31-201ENST00000504812 1408 ntBASIC13.9□□□□□ -0.18
DUX1O43812 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 MARK2P16-201ENST00000605714 1723 ntBASIC13.9□□□□□ -0.18
DUX1O43812 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 MIR557-201ENST00000385239 98 ntBASIC13.9□□□□□ -0.18
DUX1O43812 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 AL807761.2-201ENST00000422849 729 ntBASIC13.9□□□□□ -0.18
DUX1O43812 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 AC098935.1-201ENST00000446057 611 ntBASIC13.9□□□□□ -0.18
DUX1O43812 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 RN7SL181P-201ENST00000462921 277 ntBASIC13.9□□□□□ -0.18
DUX1O43812 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.9□□□□□ -0.18
DUX1O43812 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.9□□□□□ -0.18
DUX1O43812 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.9□□□□□ -0.18
DUX1O43812 AC005632.3-201ENST00000605544 308 ntBASIC13.9□□□□□ -0.18
DUX1O43812 AC073352.2-201ENST00000609385 439 ntBASIC13.9□□□□□ -0.18
DUX1O43812 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
DUX1O43812 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
DUX1O43812 AC104640.1-201ENST00000562617 2109 ntBASIC13.9□□□□□ -0.18
DUX1O43812 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX1O43812 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
DUX1O43812 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
DUX1O43812 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DUX1O43812 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX1O43812 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX1O43812 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DUX1O43812 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
DUX1O43812 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.89□□□□□ -0.19
DUX1O43812 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.89□□□□□ -0.19
DUX1O43812 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DUX1O43812 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUX1O43812 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DUX1O43812 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
DUX1O43812 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.89□□□□□ -0.19
DUX1O43812 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.89□□□□□ -0.19
DUX1O43812 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 AC092580.1-201ENST00000433998 658 ntBASIC13.89□□□□□ -0.19
DUX1O43812 AC104784.1-201ENST00000473096 294 ntBASIC13.89□□□□□ -0.19
DUX1O43812 AC022447.6-201ENST00000515522 438 ntBASIC13.89□□□□□ -0.19
DUX1O43812 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUX1O43812 KRT8P1-201ENST00000557533 1207 ntBASIC13.89□□□□□ -0.19
DUX1O43812 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms