Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ATP2A1O14983 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A1O14983 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATP2A1O14983 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 AP000356.3-201ENST00000382243 753 ntBASIC16.61■□□□□ 0.25
ATP2A1O14983 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 RPL7P35-201ENST00000446943 740 ntBASIC16.61■□□□□ 0.25
ATP2A1O14983 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 AP002803.1-201ENST00000528836 498 ntBASIC16.61■□□□□ 0.25
ATP2A1O14983 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 AC007326.1-201ENST00000604539 458 ntBASIC16.61■□□□□ 0.25
ATP2A1O14983 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.61■□□□□ 0.25
ATP2A1O14983 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP2A1O14983 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 AP002414.2-201ENST00000591780 3365 ntBASIC16.61■□□□□ 0.25
ATP2A1O14983 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP2A1O14983 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATP2A1O14983 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 MARK2P16-201ENST00000605714 1723 ntBASIC16.6■□□□□ 0.25
ATP2A1O14983 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A1O14983 AL512430.1-201ENST00000392575 860 ntBASIC16.6■□□□□ 0.25
ATP2A1O14983 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A1O14983 AL627422.1-201ENST00000434104 580 ntBASIC16.6■□□□□ 0.25
ATP2A1O14983 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A1O14983 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.6■□□□□ 0.25
ATP2A1O14983 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 SORD2P-201ENST00000558556 1069 ntBASIC16.6■□□□□ 0.25
ATP2A1O14983 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 MIR4522-201ENST00000584932 87 ntBASIC16.6■□□□□ 0.25
ATP2A1O14983 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A1O14983 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP2A1O14983 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A1O14983 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A1O14983 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ATP2A1O14983 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms