Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 AC074044.1-201ENST00000609673 707 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 AC009118.2-201ENST00000613275 655 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.99□□□□□ -0.17
PDLIM1O00151 AF228730.6-201ENST00000641497 218 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 AC084121.3-201ENST00000641716 218 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 RN7SL832P-201ENST00000607781 1756 ntBASIC13.99□□□□□ -0.17
PDLIM1O00151 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.98□□□□□ -0.17
PDLIM1O00151 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PDLIM1O00151 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PDLIM1O00151 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AC002472.2-201ENST00000442739 958 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 SPTLC1P1-201ENST00000447199 261 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.98□□□□□ -0.17
PDLIM1O00151 MIR3197-201ENST00000582241 73 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 AC008761.3-201ENST00000624803 892 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 AL109936.8-201ENST00000641772 604 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 AC007614.4-201ENST00000564048 1827 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 AL121723.1-201ENST00000445194 1519 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PDLIM1O00151 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PDLIM1O00151 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.98□□□□□ -0.17
PDLIM1O00151 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AC110048.1-201ENST00000604293 2157 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.98□□□□□ -0.17
PDLIM1O00151 AGAP10P-201ENST00000454844 2418 ntBASIC13.98□□□□□ -0.17
PDLIM1O00151 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.97□□□□□ -0.17
PDLIM1O00151 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 AL137783.1-201ENST00000623494 1896 ntBASIC13.97□□□□□ -0.17
PDLIM1O00151 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PDLIM1O00151 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PDLIM1O00151 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PDLIM1O00151 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 AC236430.1-201ENST00000402231 743 ntBASIC13.97□□□□□ -0.17
PDLIM1O00151 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
PDLIM1O00151 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.97□□□□□ -0.17
PDLIM1O00151 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.97□□□□□ -0.17
PDLIM1O00151 SERBP1P5-201ENST00000510079 1181 ntBASIC13.97□□□□□ -0.17
PDLIM1O00151 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PDLIM1O00151 AC135586.1-201ENST00000539323 574 ntBASIC13.97□□□□□ -0.17
PDLIM1O00151 AC092337.1-201ENST00000568699 1129 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms