Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 HNRNPA1P58-201ENST00000403629 610 ntBASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC025594.1-201ENST00000469533 543 ntBASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC024075.2-201ENST00000598112 1473 ntBASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BIVM-ERCC5R4GMW8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 MIR1307-201ENST00000408840 149 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 CDCA4P4-201ENST00000435216 680 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 TBC1D3P6-201ENST00000505954 962 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC113347.2-201ENST00000512350 279 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 BAK1P2-201ENST00000532665 631 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 DGAT2L7P-201ENST00000602462 744 ntBASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BIVM-ERCC5R4GMW8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC079414.2-201ENST00000567157 1104 ntBASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC090510.3-201ENST00000615831 821 ntBASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC012617.1-204ENST00000586340 2305 ntBASIC23.33■■□□□ 1.32
BIVM-ERCC5R4GMW8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC018846.1-201ENST00000568231 183 ntBASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 KF455155.1-201ENST00000604493 303 ntBASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
BIVM-ERCC5R4GMW8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms