Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC005921.3-201ENST00000623774 2151 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 COA5-202ENST00000409997 557 ntTSL 4 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AF201337.1-201ENST00000520239 748 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AP001462.1-201ENST00000594089 452 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LINC02084-201ENST00000606069 1096 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AL138831.2-201ENST00000606564 490 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC021097.1-201ENST00000607902 574 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 BSG-214ENST00000614867 960 ntTSL 3 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 MDK-213ENST00000617138 635 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AL645728.2-202ENST00000641679 227 ntBASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 MICA-210ENST00000616296 2260 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 AC108024.1-201ENST00000626286 1721 ntBASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC7.41□□□□□ -1.22
LINC01558Q9Y6Z2 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms