Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AP4S1Q9Y587 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 AC003102.2-201ENST00000589195 1469 ntBASIC13.83□□□□□ -0.2
AP4S1Q9Y587 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 SORD2P-201ENST00000558556 1069 ntBASIC13.83□□□□□ -0.2
AP4S1Q9Y587 AC040169.1-201ENST00000565382 521 ntBASIC13.83□□□□□ -0.2
AP4S1Q9Y587 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 FAM197Y3-203ENST00000618346 717 ntBASIC13.83□□□□□ -0.2
AP4S1Q9Y587 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 AL109936.8-201ENST00000641772 604 ntBASIC13.83□□□□□ -0.2
AP4S1Q9Y587 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AP4S1Q9Y587 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 AC125807.2-201ENST00000513358 3514 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 AC024075.2-201ENST00000598112 1473 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MARK2P9-201ENST00000430958 1727 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 AL391647.1-201ENST00000395664 511 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 RPL37AP1-201ENST00000412502 279 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 NUS1P3-201ENST00000423502 862 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 AC022145.2-201ENST00000598203 171 ntBASIC13.82□□□□□ -0.2
AP4S1Q9Y587 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
AP4S1Q9Y587 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms