Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AC073869.2-201ENST00000417338 1026 ntBASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 RN7SL665P-201ENST00000578793 300 ntBASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 AL157996.1-201ENST00000624684 2299 ntBASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 KRT8P43-201ENST00000406052 1458 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 AP000358.1-201ENST00000456260 156 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 SIGLEC18P-201ENST00000602271 909 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 AC012044.1-201ENST00000603431 297 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 AL139158.3-201ENST00000641212 1562 ntBASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPC1L1Q9UHC9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 CAP2P1-201ENST00000557743 1390 ntBASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC098934.1-203ENST00000442868 1262 ntBASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 RHOQP1-201ENST00000555758 579 ntBASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPC1L1Q9UHC9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms