Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DUX4Q9UBX2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AL035633.1-201ENST00000406139 838 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC004945.1-201ENST00000416738 983 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MYCLP2-201ENST00000449268 967 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 VDAC1P7-201ENST00000462417 847 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 ELK1P1-201ENST00000485699 580 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC140912.1-201ENST00000577171 1054 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 CTBP2P3-201ENST00000585629 1255 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC000095.1-201ENST00000603208 874 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AC025181.2-201ENST00000606994 802 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 AL662799.1-202ENST00000614205 422 ntBASIC12.96□□□□□ -0.33
DUX4Q9UBX2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.96□□□□□ -0.33
DUX4Q9UBX2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 AC023024.2-201ENST00000623561 1993 ntBASIC12.96□□□□□ -0.34
DUX4Q9UBX2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
DUX4Q9UBX2 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AP002008.2-201ENST00000635926 4870 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms