Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AL157996.1-201ENST00000624684 2299 ntBASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TPRX2P-201ENST00000535362 881 ntBASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.96□□□□□ -0.17
CCM2LQ9NUG4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CCM2LQ9NUG4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms