Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 SORD2P-201ENST00000558556 1069 ntBASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 AC017083.2-201ENST00000608069 979 ntBASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 AC152010.1-201ENST00000415779 2006 ntBASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 PEG13-201ENST00000631594 5667 ntBASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRMS1Q9HCU9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRMS1Q9HCU9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRMS1Q9HCU9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BRMS1Q9HCU9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 ANKRD19P-201ENST00000338192 862 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 MIR326-201ENST00000362220 95 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 AC079178.1-201ENST00000420915 656 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SNX29P1-201ENST00000548357 1007 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 AC027237.1-201ENST00000560942 655 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 MIR6775-201ENST00000617557 69 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CICP20-201ENST00000443330 2801 ntBASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.89■□□□□ 0.29
BRMS1Q9HCU9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 HSPA7-201ENST00000445535 1927 ntBASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 HLA-V-201ENST00000429037 534 ntBASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 MIR6805-201ENST00000615055 62 ntBASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRMS1Q9HCU9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms