Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NICN1Q9BSH3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 PCDHA5-203ENST00000614258 4248 ntBASIC12.58□□□□□ -0.39
NICN1Q9BSH3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
NICN1Q9BSH3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 GNAQP1-201ENST00000444815 1067 ntBASIC12.58□□□□□ -0.4
NICN1Q9BSH3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AC124283.3-201ENST00000570869 594 ntBASIC12.58□□□□□ -0.4
NICN1Q9BSH3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NICN1Q9BSH3 AC015818.8-201ENST00000587907 1519 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 AC005562.1-201ENST00000583030 3219 ntBASIC12.57□□□□□ -0.4
NICN1Q9BSH3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NICN1Q9BSH3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms