Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 AL035456.1-201ENST00000456064 1369 ntBASIC11.13□□□□□ -0.63
AP1S3Q96PC3 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AP1S3Q96PC3 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 SERBP1P3-201ENST00000459980 809 ntBASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 KRT18P43-201ENST00000469825 1281 ntBASIC11.12□□□□□ -0.63
AP1S3Q96PC3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 AC018529.1-201ENST00000613063 361 ntBASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 AC105206.1-202ENST00000314927 2368 ntBASIC11.12□□□□□ -0.63
AP1S3Q96PC3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.12□□□□□ -0.63
AP1S3Q96PC3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC015802.1-201ENST00000588104 1449 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 AC097359.2-201ENST00000604992 2389 ntBASIC11.11□□□□□ -0.63
AP1S3Q96PC3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms