Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.32■□□□□ 0.04
USP13Q92995 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
USP13Q92995 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
USP13Q92995 HINT2P1-201ENST00000419438 481 ntBASIC15.32■□□□□ 0.04
USP13Q92995 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 AL157407.1-201ENST00000435784 904 ntBASIC15.32■□□□□ 0.04
USP13Q92995 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.32■□□□□ 0.04
USP13Q92995 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.32■□□□□ 0.04
USP13Q92995 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.32■□□□□ 0.04
USP13Q92995 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.32■□□□□ 0.04
USP13Q92995 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.32■□□□□ 0.04
USP13Q92995 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.32■□□□□ 0.04
USP13Q92995 AC020922.3-201ENST00000595064 547 ntBASIC15.32■□□□□ 0.04
USP13Q92995 NAP1L6-202ENST00000641404 1222 ntBASIC15.32■□□□□ 0.04
USP13Q92995 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
USP13Q92995 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.32■□□□□ 0.04
USP13Q92995 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP13Q92995 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
USP13Q92995 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
USP13Q92995 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
USP13Q92995 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 AL645933.1-201ENST00000440087 609 ntBASIC15.31■□□□□ 0.04
USP13Q92995 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.31■□□□□ 0.04
USP13Q92995 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.31■□□□□ 0.04
USP13Q92995 AC090857.1-201ENST00000527400 390 ntBASIC15.31■□□□□ 0.04
USP13Q92995 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.31■□□□□ 0.04
USP13Q92995 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 AC103988.2-201ENST00000561804 725 ntBASIC15.31■□□□□ 0.04
USP13Q92995 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 AL353770.1-201ENST00000614915 403 ntBASIC15.31■□□□□ 0.04
USP13Q92995 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.31■□□□□ 0.04
USP13Q92995 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
USP13Q92995 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
USP13Q92995 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 FGD5P1-202ENST00000614866 2498 ntBASIC15.31■□□□□ 0.04
USP13Q92995 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP13Q92995 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.3■□□□□ 0.04
USP13Q92995 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.3■□□□□ 0.04
USP13Q92995 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
USP13Q92995 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
USP13Q92995 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
USP13Q92995 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP13Q92995 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms