Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S1Q92572 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S1Q92572 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S1Q92572 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
AP3S1Q92572 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 AL355102.3-201ENST00000554299 1678 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 AC093525.8-201ENST00000624099 1342 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
AP3S1Q92572 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.89□□□□□ -0.35
AP3S1Q92572 ADH5P3-201ENST00000433842 1137 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S1Q92572 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S1Q92572 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 RN7SL828P-201ENST00000607615 303 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 AL133215.2-201ENST00000609242 977 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AP3S1Q92572 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 AC010336.1-201ENST00000539278 4739 ntBASIC12.89□□□□□ -0.35
AP3S1Q92572 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S1Q92572 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S1Q92572 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S1Q92572 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.88□□□□□ -0.35
AP3S1Q92572 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
AP3S1Q92572 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AP3S1Q92572 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.88□□□□□ -0.35
AP3S1Q92572 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 AC007969.1-201ENST00000433675 447 ntBASIC12.88□□□□□ -0.35
AP3S1Q92572 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.88□□□□□ -0.35
AP3S1Q92572 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.88□□□□□ -0.35
AP3S1Q92572 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.88□□□□□ -0.35
AP3S1Q92572 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
AP3S1Q92572 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S1Q92572 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms