Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CKAP2Q8WWK9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CKAP2Q8WWK9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 MEIS3P1-201ENST00000495167 958 ntBASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 AL445250.1-201ENST00000641671 2259 ntBASIC14.52□□□□□ -0.09
CKAP2Q8WWK9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 Z98257.2-202ENST00000641138 1548 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC004899.2-201ENST00000622993 3860 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 EIF3FP3-201ENST00000434851 1086 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC005829.1-201ENST00000570002 483 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AC093813.1-201ENST00000605066 256 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AL691403.2-201ENST00000618460 490 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 LINC02486-201ENST00000604157 3000 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 AL590440.2-201ENST00000641973 1595 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 PCDHA6-201ENST00000378126 3267 ntBASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CKAP2Q8WWK9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms