Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MIR557-201ENST00000385239 98 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 HMGA1P1-201ENST00000415560 1062 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 SCARNA12-201ENST00000459155 270 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 RN7SL258P-201ENST00000478664 300 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC079336.7-201ENST00000623428 1078 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC011474.4-201ENST00000623523 2076 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 KRT8P43-201ENST00000406052 1458 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 BANF1P3-201ENST00000412556 261 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 LINC00265-2P-201ENST00000413372 782 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC006987.1-201ENST00000413610 527 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC114947.1-202ENST00000514136 344 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC015967.2-201ENST00000624092 234 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AC006435.4-201ENST00000625037 234 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 AL356737.1-201ENST00000634391 234 ntBASIC14.53□□□□□ -0.08
CHD5Q8TDI0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.52□□□□□ -0.08
CHD5Q8TDI0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 OR2K2-202ENST00000374428 1038 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 EEF1DP6-201ENST00000449232 372 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 UPF3AP2-201ENST00000457924 1132 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 KLF17P1-201ENST00000547105 1126 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 AL139158.3-201ENST00000641212 1562 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD5Q8TDI0 AC068760.1-201ENST00000493579 1953 ntBASIC14.52□□□□□ -0.09
CHD5Q8TDI0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms