Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 KRT18P36-201ENST00000411618 1276 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 MIR3147-201ENST00000577811 66 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AL136172.1-201ENST00000598590 1394 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC097359.2-201ENST00000604992 2389 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC007718.1-201ENST00000621078 280 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC018629.1-201ENST00000623381 1736 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC092299.1-201ENST00000632679 757 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 AC010327.5-201ENST00000586923 3061 ntBASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 XBP1P1-201ENST00000436573 652 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RN7SL258P-201ENST00000478664 300 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AC026803.1-201ENST00000569130 274 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AC103691.2-201ENST00000618824 433 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AC006504.5-208ENST00000588784 2401 ntBASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHKBP1Q8TBC3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AL590440.2-201ENST00000641973 1595 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms