Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC079414.2-201ENST00000567157 1104 ntBASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC004466.2-201ENST00000614749 516 ntBASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AC026336.4-201ENST00000624565 1050 ntBASIC17.89■□□□□ 0.45
COL23A1Q86Y22 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL23A1Q86Y22 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AHCYP3-201ENST00000420053 1279 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AL161932.2-201ENST00000435436 679 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 MAGEA7P-201ENST00000436482 942 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 ALG1L7P-201ENST00000502317 768 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 SLC25A15P3-201ENST00000505530 290 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AC093300.1-201ENST00000510368 1201 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 MIR4746-201ENST00000579802 71 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 AC026691.1-201ENST00000602502 2017 ntBASIC17.88■□□□□ 0.45
COL23A1Q86Y22 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.88■□□□□ 0.45
COL23A1Q86Y22 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.87■□□□□ 0.45
COL23A1Q86Y22 RPL14-203ENST00000416518 812 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms