Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDK3Q00526 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 RN7SL832P-201ENST00000607781 1756 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 AC015656.1-201ENST00000624209 3578 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.28□□□□□ -0.12
CDK3Q00526 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.28□□□□□ -0.12
CDK3Q00526 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.28□□□□□ -0.12
CDK3Q00526 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 RN7SL769P-201ENST00000469386 295 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 AC116345.2-201ENST00000512837 523 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.28□□□□□ -0.12
CDK3Q00526 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.28□□□□□ -0.12
CDK3Q00526 AP002353.1-201ENST00000528257 1599 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 AC232323.1-201ENST00000540724 2099 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 RHOQP1-201ENST00000555758 579 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 MIR4754-201ENST00000582477 89 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 AC104506.1-201ENST00000609247 429 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.28□□□□□ -0.12
CDK3Q00526 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDK3Q00526 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDK3Q00526 LINC00552-201ENST00000625151 2579 ntBASIC14.28□□□□□ -0.12
CDK3Q00526 AC097359.2-201ENST00000604992 2389 ntBASIC14.27□□□□□ -0.12
CDK3Q00526 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.27□□□□□ -0.12
CDK3Q00526 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.27□□□□□ -0.12
CDK3Q00526 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.27□□□□□ -0.12
CDK3Q00526 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK3Q00526 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDK3Q00526 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDK3Q00526 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 AC090505.1-201ENST00000430515 1834 ntBASIC14.27□□□□□ -0.12
CDK3Q00526 AC015909.3-201ENST00000572855 1794 ntBASIC14.27□□□□□ -0.12
CDK3Q00526 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK3Q00526 AC015802.1-201ENST00000588104 1449 ntBASIC14.27□□□□□ -0.12
CDK3Q00526 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDK3Q00526 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK3Q00526 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
CDK3Q00526 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK3Q00526 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK3Q00526 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.27□□□□□ -0.13
CDK3Q00526 AC092580.1-201ENST00000433998 658 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms