Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.31■□□□□ 0.04
IRX4P78413 RN7SL769P-201ENST00000469386 295 ntBASIC15.31■□□□□ 0.04
IRX4P78413 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
IRX4P78413 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.31■□□□□ 0.04
IRX4P78413 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 AP001267.2-201ENST00000532619 2086 ntBASIC15.31■□□□□ 0.04
IRX4P78413 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
IRX4P78413 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.31■□□□□ 0.04
IRX4P78413 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.3■□□□□ 0.04
IRX4P78413 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.3■□□□□ 0.04
IRX4P78413 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 MIR4722-201ENST00000578292 60 ntBASIC15.3■□□□□ 0.04
IRX4P78413 MIR3619-201ENST00000579667 83 ntBASIC15.3■□□□□ 0.04
IRX4P78413 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 REXO1L4P-201ENST00000605109 1937 ntBASIC15.3■□□□□ 0.04
IRX4P78413 AL451050.2-201ENST00000606967 682 ntBASIC15.3■□□□□ 0.04
IRX4P78413 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.3■□□□□ 0.04
IRX4P78413 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IRX4P78413 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IRX4P78413 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.3■□□□□ 0.04
IRX4P78413 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IRX4P78413 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 AC005252.3-201ENST00000623855 2258 ntBASIC15.29■□□□□ 0.04
IRX4P78413 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.29■□□□□ 0.04
IRX4P78413 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
IRX4P78413 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
IRX4P78413 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IRX4P78413 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.29■□□□□ 0.04
IRX4P78413 CD8B2-202ENST00000417670 633 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms