Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CDH15P55291 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.71□□□□□ -0.22
CDH15P55291 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CDH15P55291 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CDH15P55291 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 AGAP12P-201ENST00000585227 2359 ntBASIC13.71□□□□□ -0.22
CDH15P55291 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDH15P55291 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.71□□□□□ -0.22
CDH15P55291 AP3S2-216ENST00000617003 1561 ntBASIC13.71□□□□□ -0.22
CDH15P55291 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH15P55291 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDH15P55291 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDH15P55291 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH15P55291 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH15P55291 TARDBPP1-201ENST00000442013 1203 ntBASIC13.7□□□□□ -0.22
CDH15P55291 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH15P55291 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH15P55291 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.7□□□□□ -0.22
CDH15P55291 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CDH15P55291 AC007967.4-201ENST00000614700 386 ntBASIC13.7□□□□□ -0.22
CDH15P55291 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.7□□□□□ -0.22
CDH15P55291 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 AC005014.1-201ENST00000432006 2976 ntBASIC13.7□□□□□ -0.22
CDH15P55291 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.7□□□□□ -0.22
CDH15P55291 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDH15P55291 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 AC005034.1-201ENST00000426657 489 ntBASIC13.69□□□□□ -0.22
CDH15P55291 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 AC004890.2-204ENST00000481968 304 ntBASIC13.69□□□□□ -0.22
CDH15P55291 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH15P55291 AC027369.6-201ENST00000525520 931 ntBASIC13.69□□□□□ -0.22
CDH15P55291 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.69□□□□□ -0.22
CDH15P55291 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 AC012645.4-201ENST00000610691 1061 ntBASIC13.69□□□□□ -0.22
CDH15P55291 AL035252.4-201ENST00000624174 288 ntBASIC13.69□□□□□ -0.22
CDH15P55291 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CDH15P55291 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CDH15P55291 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.69□□□□□ -0.22
CDH15P55291 AC106818.1-201ENST00000623223 3242 ntBASIC13.69□□□□□ -0.22
CDH15P55291 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms