Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CASP6P55212 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CASP6P55212 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.21□□□□□ -0.3
CASP6P55212 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.21□□□□□ -0.3
CASP6P55212 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CASP6P55212 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.21□□□□□ -0.3
CASP6P55212 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CASP6P55212 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CASP6P55212 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CASP6P55212 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 AC010491.1-201ENST00000563101 2797 ntBASIC13.2□□□□□ -0.3
CASP6P55212 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.2□□□□□ -0.3
CASP6P55212 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.2□□□□□ -0.3
CASP6P55212 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.2□□□□□ -0.3
CASP6P55212 RN7SL181P-201ENST00000462921 277 ntBASIC13.2□□□□□ -0.3
CASP6P55212 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.2□□□□□ -0.3
CASP6P55212 MIR4783-201ENST00000580343 82 ntBASIC13.2□□□□□ -0.3
CASP6P55212 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 AL805961.1-201ENST00000642026 753 ntBASIC13.2□□□□□ -0.3
CASP6P55212 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 AC073869.1-201ENST00000415574 2762 ntBASIC13.2□□□□□ -0.3
CASP6P55212 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.2□□□□□ -0.3
CASP6P55212 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CASP6P55212 FAM90A7P-201ENST00000382628 1395 ntBASIC13.2□□□□□ -0.3
CASP6P55212 FAM90A23P-201ENST00000400136 1395 ntBASIC13.2□□□□□ -0.3
CASP6P55212 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CASP6P55212 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.19□□□□□ -0.3
CASP6P55212 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CASP6P55212 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.19□□□□□ -0.3
CASP6P55212 AC074138.1-201ENST00000611182 1303 ntBASIC13.19□□□□□ -0.3
CASP6P55212 AC092978.1-202ENST00000637590 1327 ntBASIC13.19□□□□□ -0.3
CASP6P55212 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CASP6P55212 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CASP6P55212 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms