Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
APOC4P55056 FAS-202ENST00000352159 1722 ntTSL 5 BASIC10.7□□□□□ -0.7
APOC4P55056 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 AJ011931.1-201ENST00000618749 2492 ntBASIC10.69□□□□□ -0.7
APOC4P55056 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 AC126335.2-201ENST00000623362 4637 ntBASIC10.69□□□□□ -0.7
APOC4P55056 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 AC104640.1-201ENST00000562617 2109 ntBASIC10.69□□□□□ -0.7
APOC4P55056 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 AL596257.1-201ENST00000641463 2694 ntBASIC10.69□□□□□ -0.7
APOC4P55056 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 AC239868.1-201ENST00000369385 493 ntBASIC10.69□□□□□ -0.7
APOC4P55056 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
APOC4P55056 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.69□□□□□ -0.7
APOC4P55056 AC024681.1-201ENST00000521917 487 ntBASIC10.69□□□□□ -0.7
APOC4P55056 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 MIR3619-201ENST00000579667 83 ntBASIC10.69□□□□□ -0.7
APOC4P55056 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.69□□□□□ -0.7
APOC4P55056 AC106872.11-201ENST00000605838 421 ntBASIC10.69□□□□□ -0.7
APOC4P55056 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.69□□□□□ -0.7
APOC4P55056 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
APOC4P55056 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.69□□□□□ -0.7
APOC4P55056 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
APOC4P55056 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC10.69□□□□□ -0.7
APOC4P55056 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
APOC4P55056 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.68□□□□□ -0.7
APOC4P55056 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.68□□□□□ -0.7
APOC4P55056 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
APOC4P55056 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.68□□□□□ -0.7
APOC4P55056 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
APOC4P55056 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
APOC4P55056 KRT8P21-201ENST00000430398 1491 ntBASIC10.68□□□□□ -0.7
APOC4P55056 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.68□□□□□ -0.7
APOC4P55056 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.68□□□□□ -0.7
APOC4P55056 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.68□□□□□ -0.7
APOC4P55056 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.68□□□□□ -0.7
APOC4P55056 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.68□□□□□ -0.7
APOC4P55056 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
APOC4P55056 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms