Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.64■□□□□ 0.41
NUP98P52948 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.64■□□□□ 0.41
NUP98P52948 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP98P52948 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP98P52948 TNRC18P2-201ENST00000417666 2714 ntBASIC17.64■□□□□ 0.41
NUP98P52948 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.64■□□□□ 0.41
NUP98P52948 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 TBC1D27-202ENST00000424239 1573 ntBASIC17.63■□□□□ 0.41
NUP98P52948 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.63■□□□□ 0.41
NUP98P52948 PSAT1P2-201ENST00000426107 972 ntBASIC17.63■□□□□ 0.41
NUP98P52948 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.63■□□□□ 0.41
NUP98P52948 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.63■□□□□ 0.41
NUP98P52948 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.63■□□□□ 0.41
NUP98P52948 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NUP98P52948 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP98P52948 EEF1GP8-201ENST00000506566 1154 ntBASIC17.63■□□□□ 0.41
NUP98P52948 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.63■□□□□ 0.41
NUP98P52948 AC023968.2-201ENST00000560593 1049 ntBASIC17.63■□□□□ 0.41
NUP98P52948 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP98P52948 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP98P52948 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
NUP98P52948 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NUP98P52948 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP98P52948 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP98P52948 AL512599.1-201ENST00000430724 685 ntBASIC17.62■□□□□ 0.41
NUP98P52948 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP98P52948 AC093300.1-201ENST00000510368 1201 ntBASIC17.62■□□□□ 0.41
NUP98P52948 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NUP98P52948 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.62■□□□□ 0.41
NUP98P52948 BAP1-211ENST00000615113 489 ntBASIC17.62■□□□□ 0.41
NUP98P52948 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms