Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM5CP41229 AC092115.1-201ENST00000566277 1402 ntBASIC21.16■□□□□ 0.98
KDM5CP41229 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM5CP41229 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 KRT8P30-201ENST00000432100 650 ntBASIC21.16■□□□□ 0.98
KDM5CP41229 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.16■□□□□ 0.98
KDM5CP41229 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC21.16■□□□□ 0.98
KDM5CP41229 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC21.16■□□□□ 0.98
KDM5CP41229 MED11-202ENST00000573708 802 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM5CP41229 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.16■□□□□ 0.98
KDM5CP41229 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM5CP41229 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC21.16■□□□□ 0.98
KDM5CP41229 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KDM5CP41229 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KDM5CP41229 CICP24-201ENST00000605464 2705 ntBASIC21.15■□□□□ 0.98
KDM5CP41229 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.15■□□□□ 0.98
KDM5CP41229 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KDM5CP41229 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.15■□□□□ 0.98
KDM5CP41229 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
KDM5CP41229 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC21.15■□□□□ 0.98
KDM5CP41229 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC21.15■□□□□ 0.98
KDM5CP41229 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC21.15■□□□□ 0.98
KDM5CP41229 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC21.15■□□□□ 0.98
KDM5CP41229 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KDM5CP41229 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.15■□□□□ 0.98
KDM5CP41229 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 AC018442.1-201ENST00000421439 2061 ntBASIC21.15■□□□□ 0.98
KDM5CP41229 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC21.15■□□□□ 0.98
KDM5CP41229 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC21.15■□□□□ 0.98
KDM5CP41229 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KDM5CP41229 U3.5-201ENST00000363448 216 ntBASIC21.14■□□□□ 0.98
KDM5CP41229 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC21.14■□□□□ 0.98
KDM5CP41229 AC103592.1-201ENST00000394513 664 ntBASIC21.14■□□□□ 0.98
KDM5CP41229 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KDM5CP41229 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KDM5CP41229 RN7SL351P-201ENST00000469306 248 ntBASIC21.14■□□□□ 0.98
KDM5CP41229 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC21.14■□□□□ 0.98
KDM5CP41229 AC100858.1-201ENST00000514059 1228 ntBASIC21.14■□□□□ 0.98
KDM5CP41229 AC078814.4-201ENST00000546650 327 ntBASIC21.14■□□□□ 0.98
KDM5CP41229 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KDM5CP41229 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KDM5CP41229 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KDM5CP41229 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
KDM5CP41229 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.14■□□□□ 0.97
KDM5CP41229 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 AL354702.1-201ENST00000442006 1960 ntBASIC21.14■□□□□ 0.97
KDM5CP41229 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.14■□□□□ 0.97
KDM5CP41229 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC21.14■□□□□ 0.97
KDM5CP41229 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.14■□□□□ 0.97
KDM5CP41229 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC21.14■□□□□ 0.97
KDM5CP41229 PHF23-213ENST00000613632 850 ntTSL 5 BASIC21.14■□□□□ 0.97
KDM5CP41229 AC113385.2-201ENST00000614465 762 ntBASIC21.14■□□□□ 0.97
KDM5CP41229 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC21.14■□□□□ 0.97
KDM5CP41229 AC110057.1-201ENST00000636031 898 ntBASIC21.14■□□□□ 0.97
KDM5CP41229 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KDM5CP41229 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.14■□□□□ 0.97
KDM5CP41229 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
KDM5CP41229 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
KDM5CP41229 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
KDM5CP41229 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.13■□□□□ 0.97
KDM5CP41229 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
KDM5CP41229 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KDM5CP41229 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.13■□□□□ 0.97
KDM5CP41229 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms