Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RFC5P40937 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC5P40937 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC5P40937 MYO15B-237ENST00000642007 4893 ntBASIC16.06■□□□□ 0.16
RFC5P40937 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 AC245884.6-201ENST00000515672 1067 ntBASIC16.06■□□□□ 0.16
RFC5P40937 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC5P40937 POU5F1P2-201ENST00000521750 823 ntBASIC16.06■□□□□ 0.16
RFC5P40937 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC5P40937 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.06■□□□□ 0.16
RFC5P40937 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC5P40937 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC5P40937 ACTG1P22-201ENST00000603793 1099 ntBASIC16.06■□□□□ 0.16
RFC5P40937 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.06■□□□□ 0.16
RFC5P40937 AC090386.2-201ENST00000623010 1039 ntBASIC16.06■□□□□ 0.16
RFC5P40937 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC5P40937 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.06■□□□□ 0.16
RFC5P40937 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC5P40937 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFC5P40937 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RFC5P40937 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 LAP3P2-201ENST00000454686 1454 ntBASIC16.05■□□□□ 0.16
RFC5P40937 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.05■□□□□ 0.16
RFC5P40937 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 AL353637.1-201ENST00000451571 732 ntBASIC16.05■□□□□ 0.16
RFC5P40937 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.05■□□□□ 0.16
RFC5P40937 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.05■□□□□ 0.16
RFC5P40937 AC104506.1-201ENST00000609247 429 ntBASIC16.05■□□□□ 0.16
RFC5P40937 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RFC5P40937 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RFC5P40937 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC5P40937 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFC5P40937 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms