Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COL15A1P39059 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.19■□□□□ 0.5
COL15A1P39059 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL15A1P39059 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.19■□□□□ 0.5
COL15A1P39059 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 AC064801.2-201ENST00000625052 1303 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.18■□□□□ 0.5
COL15A1P39059 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.18■□□□□ 0.5
COL15A1P39059 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.18■□□□□ 0.5
COL15A1P39059 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.18■□□□□ 0.5
COL15A1P39059 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.18■□□□□ 0.5
COL15A1P39059 RNA5SP406-201ENST00000516106 112 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.18■□□□□ 0.5
COL15A1P39059 NDUFB10P1-201ENST00000567319 521 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 AC012073.1-201ENST00000606114 1108 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.18■□□□□ 0.5
COL15A1P39059 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COL15A1P39059 CROCCP1-201ENST00000426910 5675 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 AC113367.3-201ENST00000508316 1912 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COL15A1P39059 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 AC215219.1-201ENST00000400706 1817 ntBASIC18.18■□□□□ 0.5
COL15A1P39059 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.18■□□□□ 0.5
COL15A1P39059 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.18■□□□□ 0.5
COL15A1P39059 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL15A1P39059 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
COL15A1P39059 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.17■□□□□ 0.5
COL15A1P39059 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.17■□□□□ 0.5
COL15A1P39059 AC108734.2-201ENST00000420887 1069 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 PPP1R2P4-201ENST00000424051 595 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.17■□□□□ 0.5
COL15A1P39059 AC226150.1-201ENST00000544259 466 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.17■□□□□ 0.5
COL15A1P39059 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC18.17■□□□□ 0.5
COL15A1P39059 AC005586.2-201ENST00000563946 837 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.17■□□□□ 0.5
COL15A1P39059 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.17■□□□□ 0.5
COL15A1P39059 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.17■□□□□ 0.5
COL15A1P39059 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL15A1P39059 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
COL15A1P39059 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 AC106881.1-201ENST00000605849 3329 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL15A1P39059 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms