Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V1AP38606 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP6V1AP38606 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 RN7SL582P-201ENST00000491078 279 ntBASIC18.34■□□□□ 0.53
ATP6V1AP38606 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 RN7SL767P-201ENST00000493013 295 ntBASIC18.34■□□□□ 0.53
ATP6V1AP38606 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 AC145285.5-201ENST00000562217 361 ntBASIC18.34■□□□□ 0.53
ATP6V1AP38606 AC010632.2-201ENST00000588369 1224 ntBASIC18.34■□□□□ 0.53
ATP6V1AP38606 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V1AP38606 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V1AP38606 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP6V1AP38606 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.33■□□□□ 0.53
ATP6V1AP38606 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
ATP6V1AP38606 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
ATP6V1AP38606 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V1AP38606 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 AC244197.1-201ENST00000456494 951 ntBASIC18.33■□□□□ 0.52
ATP6V1AP38606 IGHV1-12-201ENST00000518307 205 ntBASIC18.33■□□□□ 0.52
ATP6V1AP38606 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 GOLGA2P7-209ENST00000560408 745 ntBASIC18.33■□□□□ 0.52
ATP6V1AP38606 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 AP005212.2-201ENST00000584979 510 ntBASIC18.33■□□□□ 0.52
ATP6V1AP38606 EIF5AP2-201ENST00000585668 1047 ntBASIC18.33■□□□□ 0.52
ATP6V1AP38606 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V1AP38606 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V1AP38606 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V1AP38606 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V1AP38606 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms