Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.69□□□□□ -0.06
LTBRP36941 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.69□□□□□ -0.06
LTBRP36941 RPL13AP3-202ENST00000494676 1473 ntBASIC14.69□□□□□ -0.06
LTBRP36941 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LTBRP36941 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LTBRP36941 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LTBRP36941 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.69□□□□□ -0.06
LTBRP36941 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.68□□□□□ -0.06
LTBRP36941 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 RPSAP12-201ENST00000435879 888 ntBASIC14.68□□□□□ -0.06
LTBRP36941 MAGEA7P-201ENST00000436482 942 ntBASIC14.68□□□□□ -0.06
LTBRP36941 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 RN7SL351P-201ENST00000469306 248 ntBASIC14.68□□□□□ -0.06
LTBRP36941 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.68□□□□□ -0.06
LTBRP36941 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.68□□□□□ -0.06
LTBRP36941 CSTP2-201ENST00000610599 398 ntBASIC14.68□□□□□ -0.06
LTBRP36941 AC004466.2-201ENST00000614749 516 ntBASIC14.68□□□□□ -0.06
LTBRP36941 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LTBRP36941 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
LTBRP36941 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.68□□□□□ -0.06
LTBRP36941 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
LTBRP36941 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.67□□□□□ -0.06
LTBRP36941 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 PRORSD1P-202ENST00000563365 2154 ntBASIC14.67□□□□□ -0.06
LTBRP36941 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LTBRP36941 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBRP36941 AC098657.1-201ENST00000416270 1135 ntBASIC14.67□□□□□ -0.06
LTBRP36941 ZNF877P-201ENST00000437614 612 ntBASIC14.67□□□□□ -0.06
LTBRP36941 AC010900.1-201ENST00000449849 1296 ntBASIC14.67□□□□□ -0.06
LTBRP36941 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 PEBP1P3-201ENST00000455475 548 ntBASIC14.67□□□□□ -0.06
LTBRP36941 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 AC147876.1-201ENST00000504408 322 ntBASIC14.67□□□□□ -0.06
LTBRP36941 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 AC132825.4-202ENST00000578792 434 ntBASIC14.67□□□□□ -0.06
LTBRP36941 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 AC113385.2-201ENST00000614465 762 ntBASIC14.67□□□□□ -0.06
LTBRP36941 AC020904.3-201ENST00000624199 442 ntBASIC14.67□□□□□ -0.06
LTBRP36941 AL357143.1-203ENST00000639750 881 ntBASIC14.67□□□□□ -0.06
LTBRP36941 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms