Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 AC008021.1-201ENST00000474180 414 ntBASIC18.49■□□□□ 0.55
RXRBP28702 RNA5SP420-201ENST00000516997 137 ntBASIC18.49■□□□□ 0.55
RXRBP28702 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 BCAR1P1-201ENST00000553953 636 ntBASIC18.49■□□□□ 0.55
RXRBP28702 FOS-205ENST00000555242 629 ntTSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 RN7SL455P-201ENST00000580629 282 ntBASIC18.49■□□□□ 0.55
RXRBP28702 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.49■□□□□ 0.55
RXRBP28702 AC064850.1-201ENST00000413279 1398 ntBASIC18.49■□□□□ 0.55
RXRBP28702 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 NME1-209ENST00000511355 1645 ntTSL 5 BASIC18.49■□□□□ 0.55
RXRBP28702 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.48■□□□□ 0.55
RXRBP28702 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 SOD1-202ENST00000389995 865 ntTSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 PHBP18-201ENST00000546648 813 ntBASIC18.48■□□□□ 0.55
RXRBP28702 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 AC133555.4-201ENST00000569081 152 ntBASIC18.48■□□□□ 0.55
RXRBP28702 PMM2-216ENST00000569958 698 ntTSL 2 BASIC18.48■□□□□ 0.55
RXRBP28702 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.48■□□□□ 0.55
RXRBP28702 PSME3-213ENST00000592169 826 ntTSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 PDLIM1P1-201ENST00000604187 969 ntBASIC18.48■□□□□ 0.55
RXRBP28702 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RXRBP28702 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.48■□□□□ 0.55
RXRBP28702 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RXRBP28702 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RXRBP28702 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RXRBP28702 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 AC105250.1-201ENST00000509378 2057 ntBASIC18.48■□□□□ 0.55
RXRBP28702 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RXRBP28702 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RXRBP28702 SFPQP1-201ENST00000446621 1786 ntBASIC18.47■□□□□ 0.55
RXRBP28702 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RXRBP28702 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
RXRBP28702 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RXRBP28702 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.47■□□□□ 0.55
RXRBP28702 ALMS1P1-201ENST00000428767 921 ntBASIC18.47■□□□□ 0.55
RXRBP28702 PGK1P2-201ENST00000431702 1214 ntBASIC18.47■□□□□ 0.55
RXRBP28702 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC18.47■□□□□ 0.55
RXRBP28702 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.47■□□□□ 0.55
RXRBP28702 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.47■□□□□ 0.55
RXRBP28702 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC18.47■□□□□ 0.55
RXRBP28702 AL031673.1-201ENST00000611460 466 ntBASIC18.47■□□□□ 0.55
RXRBP28702 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC18.47■□□□□ 0.55
RXRBP28702 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.47■□□□□ 0.55
RXRBP28702 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.47■□□□□ 0.55
RXRBP28702 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RXRBP28702 CCT8L1P-201ENST00000465400 1674 ntBASIC18.47■□□□□ 0.55
RXRBP28702 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 LINC00115-201ENST00000473798 1317 ntBASIC18.47■□□□□ 0.55
RXRBP28702 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RXRBP28702 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RXRBP28702 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.46■□□□□ 0.55
RXRBP28702 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms