Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.68□□□□□ -0.06
APOA4P06727 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.68□□□□□ -0.06
APOA4P06727 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 AC131206.1-201ENST00000538078 1211 ntBASIC14.68□□□□□ -0.06
APOA4P06727 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.68□□□□□ -0.06
APOA4P06727 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.68□□□□□ -0.06
APOA4P06727 RAB43P1-201ENST00000561790 589 ntBASIC14.68□□□□□ -0.06
APOA4P06727 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.68□□□□□ -0.06
APOA4P06727 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 AC006453.4-201ENST00000636949 1252 ntBASIC14.68□□□□□ -0.06
APOA4P06727 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.68□□□□□ -0.06
APOA4P06727 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.68□□□□□ -0.06
APOA4P06727 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
APOA4P06727 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 AL354989.2-201ENST00000435838 1540 ntBASIC14.67□□□□□ -0.06
APOA4P06727 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 AC015688.4-201ENST00000580780 1647 ntBASIC14.67□□□□□ -0.06
APOA4P06727 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 CROCCP4-201ENST00000457096 498 ntBASIC14.67□□□□□ -0.06
APOA4P06727 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA4P06727 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.67□□□□□ -0.06
APOA4P06727 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 AC078819.1-201ENST00000547454 765 ntBASIC14.67□□□□□ -0.06
APOA4P06727 AC012085.1-201ENST00000548270 765 ntBASIC14.67□□□□□ -0.06
APOA4P06727 RHOXF1P1-202ENST00000635473 501 ntBASIC14.67□□□□□ -0.06
APOA4P06727 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.67□□□□□ -0.06
APOA4P06727 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.67□□□□□ -0.06
APOA4P06727 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOA4P06727 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 PDIA3P1-201ENST00000471856 1510 ntBASIC14.66□□□□□ -0.06
APOA4P06727 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOA4P06727 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms