Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
CD3DP04234 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 MTDHP5-201ENST00000598980 586 ntBASIC12.42□□□□□ -0.42
CD3DP04234 AC009093.7-201ENST00000623853 1223 ntBASIC12.42□□□□□ -0.42
CD3DP04234 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 AC125807.2-201ENST00000513358 3514 ntBASIC12.42□□□□□ -0.42
CD3DP04234 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD3DP04234 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CD3DP04234 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD3DP04234 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CD3DP04234 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 AL139094.1-201ENST00000405549 1188 ntBASIC12.41□□□□□ -0.42
CD3DP04234 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 AC026410.3-201ENST00000514280 936 ntBASIC12.41□□□□□ -0.42
CD3DP04234 AC022616.1-201ENST00000518688 554 ntBASIC12.41□□□□□ -0.42
CD3DP04234 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 AC131206.1-201ENST00000538078 1211 ntBASIC12.41□□□□□ -0.42
CD3DP04234 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 SORD2P-201ENST00000558556 1069 ntBASIC12.41□□□□□ -0.42
CD3DP04234 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 BX640515.1-201ENST00000617215 977 ntBASIC12.41□□□□□ -0.42
CD3DP04234 PRSS30P-206ENST00000641773 873 ntBASIC12.41□□□□□ -0.42
CD3DP04234 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.41□□□□□ -0.42
CD3DP04234 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CD3DP04234 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CD3DP04234 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CD3DP04234 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms