Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.42□□□□□ -0.1
PDGFBP01127 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.42□□□□□ -0.1
PDGFBP01127 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDGFBP01127 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PDGFBP01127 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PDGFBP01127 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDGFBP01127 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 PPP1R2P4-201ENST00000424051 595 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 STK24P1-201ENST00000455035 1291 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDGFBP01127 RN7SL128P-201ENST00000467883 305 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.41□□□□□ -0.1
PDGFBP01127 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 CES1P2-201ENST00000566467 1242 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 TYMSP2-201ENST00000589501 424 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.41□□□□□ -0.1
PDGFBP01127 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDGFBP01127 AL512324.3-201ENST00000619383 882 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14.41□□□□□ -0.1
PDGFBP01127 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 AC023024.2-201ENST00000623561 1993 ntBASIC14.41□□□□□ -0.1
PDGFBP01127 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDGFBP01127 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDGFBP01127 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.41□□□□□ -0.1
PDGFBP01127 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDGFBP01127 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.41□□□□□ -0.1
PDGFBP01127 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 KHSRPP1-201ENST00000427983 1768 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.4□□□□□ -0.1
PDGFBP01127 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFBP01127 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PDGFBP01127 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 AC006987.1-201ENST00000413610 527 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 FAM21EP-201ENST00000417804 985 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 FAM197Y6-201ENST00000420524 766 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFBP01127 PRSS3P1-201ENST00000503996 742 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 AC100858.1-201ENST00000514059 1228 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 AC005740.1-201ENST00000515639 522 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 URB1-AS1-201ENST00000534991 831 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.4□□□□□ -0.1
PDGFBP01127 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 AC254633.1-201ENST00000606790 345 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 AL357143.1-203ENST00000639750 881 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
PDGFBP01127 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
PDGFBP01127 KRT8P18-201ENST00000413425 1445 ntBASIC14.4□□□□□ -0.1
PDGFBP01127 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDGFBP01127 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDGFBP01127 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms