Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRCH4O75427 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH4O75427 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRCH4O75427 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 AC126755.1-201ENST00000525846 6405 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.14■□□□□ 0.01
LRCH4O75427 AL354877.1-201ENST00000424412 413 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 AC007274.1-201ENST00000439805 662 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 ATP5G2P4-201ENST00000442175 420 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 TMEM198B-204ENST00000484016 896 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
LRCH4O75427 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 RBM8B-201ENST00000555532 525 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 AP005482.1-201ENST00000563722 1273 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.14■□□□□ 0.01
LRCH4O75427 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRCH4O75427 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRCH4O75427 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 COX11-210ENST00000639671 696 ntBASIC15.14■□□□□ 0.01
LRCH4O75427 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.14■□□□□ 0.01
LRCH4O75427 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
LRCH4O75427 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH4O75427 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRCH4O75427 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 ST13P19-201ENST00000442505 1124 ntBASIC15.13■□□□□ 0.01
LRCH4O75427 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.13■□□□□ 0.01
LRCH4O75427 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.13■□□□□ 0.01
LRCH4O75427 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH4O75427 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.13■□□□□ 0.01
LRCH4O75427 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRCH4O75427 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 AC133552.6-201ENST00000613406 534 ntBASIC15.13■□□□□ 0.01
LRCH4O75427 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
LRCH4O75427 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH4O75427 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRCH4O75427 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH4O75427 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRCH4O75427 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms