Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CHMP2AO43633 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP2AO43633 AC005077.2-201ENST00000449786 690 ntBASIC16.41■□□□□ 0.22
CHMP2AO43633 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP2AO43633 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHMP2AO43633 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 NDUFV2P1-201ENST00000596415 907 ntBASIC16.41■□□□□ 0.22
CHMP2AO43633 AC026740.1-201ENST00000607068 791 ntBASIC16.41■□□□□ 0.22
CHMP2AO43633 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP2AO43633 AC133540.1-201ENST00000620845 1019 ntBASIC16.41■□□□□ 0.22
CHMP2AO43633 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP2AO43633 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP2AO43633 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHMP2AO43633 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP2AO43633 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 AL133338.1-201ENST00000565695 1517 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 AC011498.7-201ENST00000624986 2027 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHMP2AO43633 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 CALR4P-201ENST00000431943 946 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 AC011742.3-201ENST00000439053 820 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP2AO43633 RCC2P8-201ENST00000502779 1035 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 MARK2P5-201ENST00000507649 634 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP2AO43633 AL645939.5-201ENST00000606834 243 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AC091544.8-201ENST00000619490 361 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.4■□□□□ 0.22
CHMP2AO43633 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.4■□□□□ 0.22
CHMP2AO43633 AL139099.5-201ENST00000635274 300 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP2AO43633 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CHMP2AO43633 AC067750.1-201ENST00000608826 6545 ntBASIC16.4■□□□□ 0.22
CHMP2AO43633 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP2AO43633 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms